StructMap

NP_000535.3 antigen peptide transporter 2 isoform 1 [Homo sapiens]

Back to ProtSuite Open Another Job
Summary
Length
703 aa
Domains
8
Motifs
1
Sites
1
Topology Features
5
Architecture Map
Topology
5 features
Signal peptide
Transmembrane helix
Transmembrane helix
Transmembrane helix
Transmembrane helix
1 176 352 527 703
Domains
8 features
3a01208
PF00664
ABC_TM1F 354,364,PS51216,NEBULIN 468,702,PS50893,ABC_TRANSPORTER_2
Coiled coil
PF00005
PF13555
PF13604
PF13401
1 176 352 527 703
Motifs
1 feature
ABC_TRANSPORTER_1
1 176 352 527 703
Sites
1 feature
BINDING
1 176 352 527 703
Feature List
FeatureTypeRangeSourceDescription
Signal peptide signal_peptide 1-32 Phobius Signal peptide (Phobius), cleavage after residue 32
Transmembrane helix transmembrane 56-79 Phobius Transmembrane helix (Phobius)
Transmembrane helix transmembrane 99-119 Phobius Transmembrane helix (Phobius)
Transmembrane helix transmembrane 149-169 Phobius Transmembrane helix (Phobius)
Transmembrane helix transmembrane 189-208 Phobius Transmembrane helix (Phobius)
3a01208 domain 1-697 CDD 3a01208
PF00664 domain 153-416 HMMER
ABC_TM1F 354,364,PS51216,NEBULIN 468,702,PS50893,ABC_TRANSPORTER_2 domain 153-435 ScanProsite
Coiled coil coiled_coil 314-334 Ncoils Predicted coiled-coil region (Ncoils, via Waggawagga)
PF00005 domain 486-635 HMMER
PF13555 domain 490-513 HMMER
PF13604 domain 496-686 HMMER
PF13401 domain 498-651 HMMER
ABC_TRANSPORTER_1 motif 607-621 ScanProsite
BINDING binding_site 503-510 ScanProsite /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616"