ProtSuite Results — 8c97d4d0bd57 — Bioinformatics Lab, Brooklyn College

Analysis Progress

Sequence retrieval

Fetches sequence from UniProt / NCBI or parses your FASTA

Done

Sequence properties

MW, pI, GRAVY, stability — instant local calculation

Done

BLAST homology search

blastp vs SwissProt via NCBI — typically 2–10 min

Done

Pfam domain annotation (HMMER)

hmmscan via EBI HMMER API — typically ~1 min

Done

Signal peptide & TM (Phobius)

Phobius via EBI Job Dispatcher — ~30 sec

Done

Signal peptide (SignalP)

SignalP-4.1 via EBI — independent SP cross-validation, ~30 sec

Skipped

CDD conserved domains (NCBI)

Batch Web CD-Search — typically ~1–2 min

Done

ScanProsite patterns & sites

ExPASy ScanProsite — motifs, active sites, binding sites

Done

UniProtKB feature map

Curated UniProt positional features when an accession is available

Skipped

SMART domain architecture

SMART web adapter — best-effort HTML parsing

Skipped

InterProScan (integrative)

EBI InterProScan — slowest, most comprehensive (~5–8 min)

Done

Coiled-coil prediction (Waggawagga)

Waggawagga — Marcoil/Multicoil2/Ncoils/Paircoil2 heptad-repeat regions (~10–30 sec)

Done

DisorderPred companion

Optional disorder and low-complexity view with IUPred3 / ANCHOR2 comparisons

Skipped

SSPred consensus companion

Optional secondary-structure consensus bundled into the ProtSuite report

Skipped

Merge & deduplicate annotations

Combines all sources into one clean annotation set

Done

Domain architecture figure

PROSITE MyDomains figure (or SVG fallback)

Pending

ProtSuite Service Status

BLAST UP

core

NCBI BLAST remote search

HMMER UP

core

Pfam domain scan

Phobius UP

core

Signal peptide and TM topology

CDD UP

core

NCBI conserved domains

ScanProsite UP

core

Patterns and functional sites

UniProtKB features UP

core

Curated UniProt positional features for domains, motifs, regions, and sites

Coils UP

core

Waggawagga coiled-coil prediction (Marcoil/Multicoil2/Ncoils/Paircoil2)

SMART UP

experimental

Best-effort HTML parsing

InterProScan UP

slow

Broad integrative annotation

SignalP UP

core

DTU SignalP-5.0 — independent signal peptide cross-check for Phobius

DisorderPred UP

companion

Companion disorder profile using NetSurf plus IUPred3 / ANCHOR2 comparison.

SSPred consensus UP

companion

Optional secondary-structure consensus bundle using the SSPred service adapters.

Download: JSON report Text summary Open StructMap

Summary

Length

1008 aa

Mol. Weight

107,640 Da

6.38

GRAVY

-0.7087

Instability

37.58 (Stable)

BLAST hits

Domains / motifs

Functional sites

TM helices

Signal peptide

Yes

Run profile: BLAST, HMMER, Phobius, CDD, ScanProsite, UniProtKB features, Coils, InterProScan

Likely 5-15 minutes depending on remote queues.

Warnings

Blast BLAST timed out after 10 minutes. Try a smaller sequence or a faster database (SwissProt).

Sequence Information

Description

XP_012551551.3 collagen alpha-1(XVIII) chain isoform X3 [Bombyx mori]

Organism

Bombyx mori

Source

NCBI

Sequence (1008 aa)

MAGILYTLFSILLFQRAISSYLSGGYNLLRLDQLPSDIPTTVAPDGFPAPNFANQSVTIPISDIIEIGDYLPTPFIINAVIKLDELTATCLFQFKNNVADTYFSLCMEPASESLVRFIFNGLDTSPIETVVKVDKDSWTKYTFEIDRTSLTTRLDCILLFKQSTERPTMDVLFEPDSTLVLGESPYSEKNFMGSIKEIKIYPDSNEETIKNICNEDFKLPSIFNEENEESTDNVEEPQYIKNPEKGEKGDKGEKGEKGQKGHQCLKGEPGNSVIGPEGSQGPVGPLGPPGPVGKRGPKGECECSPNLVSTLLETMPEMRGPPGEAGPRGEPGLPGLHGEKGPEGPAGKPGLDGRVGEPGHDGVPGRNGKPGEPGPPGKDGAPGRDGEPGLRGPPGPPGPGFMETEEEKKARQIRIPGPKGEQGSPGLPGYPGPKGETGSKGDKGEIGQQGAKGEEGIMGQMGEKGKKGDKGDAGVDGRPGMHGNHGVDGRTGDKGDKGAPGLAGLPASLASILDEEMDELTKAAIIEKFRGFKGEHGDKGDKGSKGDQGNTGLAGEPGKDGRTGSTGPRGPTGPRGKQGPMGPRGYKGARGAPGPVGKVPASEIALLKGATGPPGPKGSTGEKGQKGDKAPEIDVSKLKGEKGDRGLEGSPGKPGPIGPVGPPGICEKSSPQPPIPGPPGPPGPPGSPGRDGEAGQPGASIIGPKGEPGFTMTSNNIDETVDFDSNDDEAFFKSYTIIFKTYKGLLKRTSKTPVGTLAYVLDEQILLLRVEYGWQNVNIGSMYQPSRSAPRLVPYNQPSKSPNDKRYIRLAALNEPYSGRMETHLNRVGYSAINYECHRQSMRDYNGTFVAVLSNRVTDLISLVKPSERNIPVTNLKGEILYPSWSSIFDGARSMHGQSKANIYSFDNRNVYVDQQWPKKMVWIGADTLGNRSTKAYCDEWSSDSQQMFGTASPLDKLLEQRLLSCDNKLIVLCVELSSQASRHNHKKRWPKKRVTYDKRIRKPFAGT

Physicochemical Properties

Length

1008

MW (Da)

107639.88 Da

6.38

GRAVY

-0.7087

Aromaticity

0.0625 (6.2%)

Instability Index

37.58

Helix fraction

0.2827 (28.3%)

Sheet fraction

0.2728 (27.3%)

Turn fraction

0.4137 (41.4%)

Residue Composition

14.58%

10.32%

7.94%

7.24%

6.85%

5.65%

5.26%

4.86%

4.56%

4.37%

4.07%

3.97%

3.08%

2.88%

Program
blastp

Database
SWISSPROT

Max hits
10

Returned
0

SwissProt is the curated section of UniProt — manually annotated, high-quality protein records. Hits here are reliable homologs.
Identity ≥60%: close ortholog | 30–60%: conserved family | <30%: distant or coincidental.

BLAST — Failed

BLAST search failed

BLAST timed out after 10 minutes. Try a smaller sequence or a faster database (SwissProt).

BLAST submits to NCBI's remote API. This can fail if NCBI servers are temporarily overloaded or the query times out (queries can take 2–10 minutes for longer sequences). Try resubmitting — NCBI BLAST queues are usually responsive within a few minutes.

Pipeline — hits per source

Source	Raw parsed	High-conf	Low-conf	Discarded	Final (deduped)
HMMER	8	7	1	0	7
Phobius	1	1	0	0	1
CDD	4	4	0	0	4
ScanProsite	0	0	0	0	0
InterProScan	1	0	0	1	0
Waggawagga	0	0	0	0	0
Total	14	13	1	0	11

Check annotations below, then click Generate Figure to build the domain architecture diagram.

Select annotations: 0 selected

E. Custom Annotations

▼ optional — write your own MyDomains commands

How to read and customize the domain architecture diagram

▼

Feature	Format	Reason
Signal peptide	`1,end,2,2,Signal peptide`	Labeled region at N-terminus
TM helix	`start,end,4,1,TM helix`	Distinct structural block
Disulfide bridge	`start,end,2`	Range marks the covalent span; no site pins
Active site	`pos,1`	Pin marker at each catalytic residue
Metal-binding	`pos,0`	Tick at individual ligand residue

A. Domain Architecture & Structural Features

Program	Interval	Name / Accession	Evidence	Confidence
InterProScan/PANTHER	244–709	COLLAGEN ALPHA (PTHR24023)	PANTHER PTHR24023 E: 2.40e-58	E: 2.4e-58 Score: 210
HMMER	244–300	PF01391	HMMER/Pfam PF01391	E: 1.6e-06
CDD	319–631	gly_rich_SclB superfamily (cl45768)	E-value: 3.01 × 10^-34 (N)	E: 3.0e-34
HMMER	319–371	PF01391	HMMER/Pfam PF01391	E: 1.9e-08
CDD	341–436	Collagen (pfam01391)	E-value: 7.63e-04 (-)	E: 7.6e-04
HMMER	346–399	PF01391	HMMER/Pfam PF01391	E: 6.7e-08
HMMER	417–474	PF01391	HMMER/Pfam PF01391	E: 2.7e-09
HMMER	453–506	PF01391	HMMER/Pfam PF01391	E: 6.7e-08
HMMER	738–781	PF20010 ×2	HMMER/Pfam PF20010	E: 4.4e-10
CDD	805–978	Endostatin-like superfamily (cl23985) ×2	E-value: 2.20 × 10^-52 (-)	E: 2.2e-52

B. Signal Sequence & Topology

Signal Peptide

Residues 1–19

Cleavage after residue 19
Phobius

C. Functional Sites

	Program	Position	Feature	Evidence	Confidence
None detected. (Run ScanProsite or InterProScan to find ACT_SITE, DISULFID, BINDING residues.)

D. Low-confidence / Supplementary

Real parsed hits below strict threshold — include in figure at your discretion

	Program	Interval	Name / Feature	Reason flagged
	HMMER	81–203	PF13385	evalue_too_high (1.72e-02 > 1e-2)

HMMER

8 hits parsed

Status	Type	Interval	Label	E-value / Score
high-conf	domain	244–300	PF01391	1.60e-06
high-conf	domain	319–371	PF01391	1.87e-08
high-conf	domain	346–399	PF01391	6.75e-08
high-conf	domain	417–474	PF01391	2.75e-09
high-conf	domain	453–506	PF01391	6.68e-08
discarded	domain	809–978	PF06482	4.37e-42
high-conf	domain	738–781	PF20010	4.40e-10
low-conf	domain	81–203	PF13385	1.72e-02

Phobius

1 hits parsed

Status	Type	Interval	Label	E-value / Score
high-conf	signal_peptide	1–19	Signal peptide	—

CDD

4 hits parsed

Status	Type	Interval	Label	E-value / Score
high-conf	domain	805–978	Endostatin-like superfamily (cl23985)	2.20e-52
high-conf	domain	319–631	gly_rich_SclB superfamily (cl45768)	3.01e-34
discarded	domain	738–780	Collagen_trimer superfamily (cl45392)	2.35e-07
high-conf	domain	341–436	Collagen (pfam01391)	7.63e-04

InterProScan/PANTHER

1 hits parsed

Status	Type	Interval	Label	E-value / Score
high-conf	domain	244–709	COLLAGEN ALPHA (PTHR24023)	2.40e-58

Outcome	Source	Label	Interval	Reason
low-conf	HMMER	PF13385	81–203	evalue_too_high (1.72e-02 > 1e-2)

Pfam Domain Hits (HMMER)

Raw HMMER results — merged multi-source view in Annotations tab

Domain	Start	End	Length	E-value
PF01391	244	300	57 aa	1.60e-06
PF01391	319	371	53 aa	1.87e-08
PF01391	346	399	54 aa	6.75e-08
PF01391	417	474	58 aa	2.75e-09
PF01391	453	506	54 aa	6.68e-08
PF06482	809	978	170 aa	4.37e-42
PF20010	738	781	44 aa	4.40e-10
PF13385	81	203	123 aa	1.72e-02

Signal Peptide

Phobius

✓ Detected

Residues 1–19
Cleavage after residue 19
Mature protein starts at residue 20

SignalP-4.1

Not run

Transmembrane Topology

? via Phobius (EBI)

TM Helices

Topology String

SIGNAL 1-19; 1-2 N-REGION; 3-14 H-REGION; 15-19 C-REGION; 20-1008 NON CYTOPLASMIC

No transmembrane helices detected.

{
  "_request": {
    "enabled_modules": [
      "BLAST",
      "HMMER",
      "Phobius",
      "CDD",
      "ScanProsite",
      "UniProtKB features",
      "Coils",
      "InterProScan"
    ],
    "input_type": "auto",
    "runtime_hint": "Likely 5-15 minutes depending on remote queues.",
    "submitted_at": "2026-10-12T19:25:33.194031+00:00",
    "submitted_value": "XP_012551551"
  },
  "annotation_debug": {
    "deduped": 11,
    "deduped_per_source": {
      "CDD": 4,
      "HMMER": 7,
      "InterProScan/PANTHER": 1,
      "Phobius": 1
    },
    "discarded": 0,
    "filter_log": [
      {
        "bucket": "low_confidence",
        "end": 203,
        "label": "PF13385",
        "reason": "evalue_too_high (1.72e-02 \u003e 1e-2)",
        "source": "HMMER",
        "start": 81
      }
    ],
    "filtered_per_source": {
      "CDD": 4,
      "HMMER": 7,
      "InterProScan/PANTHER": 1,
      "Phobius": 1
    },
    "high_confidence": 13,
    "low_confidence": 1,
    "raw_per_source": {
      "CDD": 4,
      "HMMER": 8,
      "InterProScan": 1,
      "Phobius": 1,
      "ScanProsite": 0,
      "Waggawagga": 0
    },
    "raw_total": 14,
    "validated": 14
  },
  "annotation_summary": {
    "domain_count": 10,
    "has_signal_peptide": true,
    "site_count": 0,
    "source_summary": {
      "CDD": 4,
      "HMMER": 8,
      "InterProScan": 1,
      "Phobius": 1,
      "ScanProsite": 0,
      "Waggawagga": 0
    },
    "tm_helix_count": 0
  },
  "annotations": [
    {
      "accession": "",
      "description": "Signal peptide (Phobius), cleavage after residue 19",
      "display_priority": 10,
      "e_value": null,
      "end": 19,
      "evidence": "Phobius  SP 1\u201319",
      "feature_type": "signal_peptide",
      "label": "Signal peptide",
      "score": null,
      "source": "Phobius",
      "source_support": [
        "Phobius"
      ],
      "start": 1
    },
    {
      "accession": "PTHR24023",
      "description": "COLLAGEN ALPHA",
      "display_priority": 30,
      "e_value": 2.4e-58,
      "end": 709,
      "evidence": "PANTHER  PTHR24023  E: 2.40e-58",
      "feature_type": "domain",
      "label": "COLLAGEN ALPHA",
      "score": 209.7,
      "source": "InterProScan/PANTHER",
      "source_support": [
        "InterProScan/PANTHER"
      ],
      "start": 244
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 1.5957356291112995e-06,
      "end": 300,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 244
    },
    {
      "accession": "cl45768",
      "description": "gly_rich_SclB superfamily",
      "display_priority": 30,
      "e_value": 3.00524e-34,
      "end": 631,
      "evidence": "E-value: 3.01 \u00d7 10^-34  (N)",
      "feature_type": "domain",
      "label": "gly_rich_SclB superfamily",
      "score": null,
      "source": "CDD",
      "source_support": [
        "CDD"
      ],
      "start": 319
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 1.8724739059884455e-08,
      "end": 371,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 319
    },
    {
      "accession": "pfam01391",
      "description": "Collagen",
      "display_priority": 30,
      "e_value": 0.000762865,
      "end": 436,
      "evidence": "E-value: 7.63e-04  (-)",
      "feature_type": "domain",
      "label": "Collagen",
      "score": null,
      "source": "CDD",
      "source_support": [
        "CDD"
      ],
      "start": 341
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 6.745780967081673e-08,
      "end": 399,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 346
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 2.7453866018640928e-09,
      "end": 474,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 417
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 6.678592627050783e-08,
      "end": 506,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 453
    },
    {
      "accession": "PF20010",
      "description": "",
      "display_priority": 30,
      "e_value": 4.395837408623583e-10,
      "end": 781,
      "evidence": "HMMER/Pfam  PF20010",
      "feature_type": "domain",
      "label": "PF20010",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER",
        "CDD"
      ],
      "start": 738
    },
    {
      "accession": "cl23985",
      "description": "Endostatin-like superfamily",
      "display_priority": 30,
      "e_value": 2.20082e-52,
      "end": 978,
      "evidence": "E-value: 2.20 \u00d7 10^-52  (-)",
      "feature_type": "domain",
      "label": "Endostatin-like superfamily",
      "score": null,
      "source": "CDD",
      "source_support": [
        "CDD",
        "HMMER"
      ],
      "start": 805
    }
  ],
  "blast": {
    "max_hits_requested": 10
  },
  "companion_disorder": {},
  "companion_sspred": {},
  "completed_at": "2026-10-12 19:41 UTC",
  "figure_ok": false,
  "figure_renderer": "none",
  "hmmer": {
    "domains": [
      {
        "description": "",
        "e_value": 1.5957356291112995e-06,
        "name": "PF01391",
        "seq_end": 300,
        "seq_start": 244
      },
      {
        "description": "",
        "e_value": 1.8724739059884455e-08,
        "name": "PF01391",
        "seq_end": 371,
        "seq_start": 319
      },
      {
        "description": "",
        "e_value": 6.745780967081673e-08,
        "name": "PF01391",
        "seq_end": 399,
        "seq_start": 346
      },
      {
        "description": "",
        "e_value": 2.7453866018640928e-09,
        "name": "PF01391",
        "seq_end": 474,
        "seq_start": 417
      },
      {
        "description": "",
        "e_value": 6.678592627050783e-08,
        "name": "PF01391",
        "seq_end": 506,
        "seq_start": 453
      },
      {
        "description": "",
        "e_value": 4.365096960852471e-42,
        "name": "PF06482",
        "seq_end": 978,
        "seq_start": 809
      },
      {
        "description": "",
        "e_value": 4.395837408623583e-10,
        "name": "PF20010",
        "seq_end": 781,
        "seq_start": 738
      },
      {
        "description": "",
        "e_value": 0.017208787978945376,
        "name": "PF13385",
        "seq_end": 203,
        "seq_start": 81
      }
    ]
  },
  "job_id": "8c97d4d0bd57",
  "low_confidence_annotations": [
    {
      "accession": "PF13385",
      "description": "",
      "display_priority": 30,
      "e_value": 0.017208787978945376,
      "end": 203,
      "evidence": "HMMER/Pfam  PF13385",
      "feature_type": "domain",
      "filter_reason": "evalue_too_high (1.72e-02 \u003e 1e-2)",
      "label": "PF13385",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 81
    }
  ],
  "module_errors": {
    "blast": "BLAST timed out after 10 minutes. Try a smaller sequence or a faster database (SwissProt)."
  },
  "module_warnings": {},
  "motif_results": [],
  "phobius": {
    "has_signal_peptide": true,
    "signal_peptide_end": 19,
    "tm_count": 0,
    "tm_helices": [],
    "topology": "SIGNAL 1-19; 1-2 N-REGION; 3-14 H-REGION; 15-19 C-REGION; 20-1008 NON CYTOPLASMIC"
  },
  "properties": {
    "ambiguous_residues_replaced": 0,
    "amino_acid_count": {
      "A": 44,
      "C": 12,
      "D": 57,
      "E": 73,
      "F": 29,
      "G": 147,
      "H": 11,
      "I": 53,
      "K": 80,
      "L": 69,
      "M": 19,
      "N": 40,
      "P": 104,
      "Q": 31,
      "R": 46,
      "S": 69,
      "T": 49,
      "V": 41,
      "W": 7,
      "Y": 27
    },
    "amino_acid_percent": {
      "A": 4.37,
      "C": 1.19,
      "D": 5.65,
      "E": 7.24,
      "F": 2.88,
      "G": 14.58,
      "H": 1.09,
      "I": 5.26,
      "K": 7.94,
      "L": 6.85,
      "M": 1.88,
      "N": 3.97,
      "P": 10.32,
      "Q": 3.08,
      "R": 4.56,
      "S": 6.85,
      "T": 4.86,
      "V": 4.07,
      "W": 0.69,
      "Y": 2.68
    },
    "aromaticity": 0.0625,
    "gravy": -0.7087,
    "helix_fraction": 0.2827,
    "instability_index": 37.58,
    "is_stable": true,
    "isoelectric_point": 6.38,
    "length": 1008,
    "molecular_weight_da": 107639.88,
    "sheet_fraction": 0.2728,
    "turn_fraction": 0.4137
  },
  "raw_annotations": [
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 1.5957356291112995e-06,
      "end": 300,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 244
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 1.8724739059884455e-08,
      "end": 371,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 319
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 6.745780967081673e-08,
      "end": 399,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 346
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 2.7453866018640928e-09,
      "end": 474,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 417
    },
    {
      "accession": "PF01391",
      "description": "",
      "display_priority": 30,
      "e_value": 6.678592627050783e-08,
      "end": 506,
      "evidence": "HMMER/Pfam  PF01391",
      "feature_type": "domain",
      "label": "PF01391",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 453
    },
    {
      "accession": "PF06482",
      "description": "",
      "display_priority": 30,
      "e_value": 4.365096960852471e-42,
      "end": 978,
      "evidence": "HMMER/Pfam  PF06482",
      "feature_type": "domain",
      "label": "PF06482",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 809
    },
    {
      "accession": "PF20010",
      "description": "",
      "display_priority": 30,
      "e_value": 4.395837408623583e-10,
      "end": 781,
      "evidence": "HMMER/Pfam  PF20010",
      "feature_type": "domain",
      "label": "PF20010",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 738
    },
    {
      "accession": "PF13385",
      "description": "",
      "display_priority": 30,
      "e_value": 0.017208787978945376,
      "end": 203,
      "evidence": "HMMER/Pfam  PF13385",
      "feature_type": "domain",
      "label": "PF13385",
      "score": null,
      "source": "HMMER",
      "source_support": [
        "HMMER"
      ],
      "start": 81
    },
    {
      "accession": "",
      "description": "Signal peptide (Phobius), cleavage after residue 19",
      "display_priority": 10,
      "e_value": null,
      "end": 19,
      "evidence": "Phobius  SP 1\u201319",
      "feature_type": "signal_peptide",
      "label": "Signal peptide",
      "score": null,
      "source": "Phobius",
      "source_support": [
        "Phobius"
      ],
      "start": 1
    },
    {
      "accession": "cl23985",
      "description": "Endostatin-like superfamily",
      "display_priority": 60,
      "e_value": 2.20082e-52,
      "end": 978,
      "evidence": "E-value: 2.20 \u00d7 10^-52  (-)",
      "feature_type": "domain",
      "label": "Endostatin-like superfamily",
      "score": null,
      "source": "CDD",
      "source_support": [
        "CDD"
      ],
      "start": 805
    },
    {
      "accession": "cl45768",
      "description": "gly_rich_SclB superfamily",
      "display_priority": 60,
      "e_value": 3.00524e-34,
      "end": 631,
      "evidence": "E-value: 3.01 \u00d7 10^-34  (N)",
      "feature_type": "domain",
      "label": "gly_rich_SclB superfamily",
      "score": null,
      "source": "CDD",
      "source_support": [
        "CDD"
      ],
      "start": 319
    },
    {
      "accession": "cl45392",
      "description": "Collagen_trimer superfamily",
      "display_priority": 60,
      "e_value": 2.34862e-07,
      "end": 780,
      "evidence": "E-value: 2.35 \u00d7 10^-7  (-)",
      "feature_type": "domain",
      "label": "Collagen_trimer superfamily",
      "score": null,
      "source": "CDD",
      "source_support": [
        "CDD"
      ],
      "start": 738
    },
    {
      "accession": "pfam01391",
      "description": "Collagen",
      "display_priority": 60,
      "e_value": 0.000762865,
      "end": 436,
      "evidence": "E-value: 7.63e-04  (-)",
      "feature_type": "domain",
      "label": "Collagen",
      "score": null,
      "source": "CDD",
      "source_support": [
        "CDD"
      ],
      "start": 341
    },
    {
      "accession": "PTHR24023",
      "description": "COLLAGEN ALPHA",
      "display_priority": 60,
      "e_value": 2.4e-58,
      "end": 709,
      "evidence": "PANTHER  PTHR24023  E: 2.40e-58",
      "feature_type": "domain",
      "label": "COLLAGEN ALPHA",
      "score": 209.7,
      "source": "InterProScan/PANTHER",
      "source_support": [
        "InterProScan/PANTHER"
      ],
      "start": 244
    }
  ],
  "retrieval": {
    "error": "",
    "header": "XP_012551551.3 collagen alpha-1(XVIII) chain isoform X3 [Bombyx mori]",
    "organism": "Bombyx mori",
    "sequence": "MAGILYTLFSILLFQRAISSYLSGGYNLLRLDQLPSDIPTTVAPDGFPAPNFANQSVTIPISDIIEIGDYLPTPFIINAVIKLDELTATCLFQFKNNVADTYFSLCMEPASESLVRFIFNGLDTSPIETVVKVDKDSWTKYTFEIDRTSLTTRLDCILLFKQSTERPTMDVLFEPDSTLVLGESPYSEKNFMGSIKEIKIYPDSNEETIKNICNEDFKLPSIFNEENEESTDNVEEPQYIKNPEKGEKGDKGEKGEKGQKGHQCLKGEPGNSVIGPEGSQGPVGPLGPPGPVGKRGPKGECECSPNLVSTLLETMPEMRGPPGEAGPRGEPGLPGLHGEKGPEGPAGKPGLDGRVGEPGHDGVPGRNGKPGEPGPPGKDGAPGRDGEPGLRGPPGPPGPGFMETEEEKKARQIRIPGPKGEQGSPGLPGYPGPKGETGSKGDKGEIGQQGAKGEEGIMGQMGEKGKKGDKGDAGVDGRPGMHGNHGVDGRTGDKGDKGAPGLAGLPASLASILDEEMDELTKAAIIEKFRGFKGEHGDKGDKGSKGDQGNTGLAGEPGKDGRTGSTGPRGPTGPRGKQGPMGPRGYKGARGAPGPVGKVPASEIALLKGATGPPGPKGSTGEKGQKGDKAPEIDVSKLKGEKGDRGLEGSPGKPGPIGPVGPPGICEKSSPQPPIPGPPGPPGPPGSPGRDGEAGQPGASIIGPKGEPGFTMTSNNIDETVDFDSNDDEAFFKSYTIIFKTYKGLLKRTSKTPVGTLAYVLDEQILLLRVEYGWQNVNIGSMYQPSRSAPRLVPYNQPSKSPNDKRYIRLAALNEPYSGRMETHLNRVGYSAINYECHRQSMRDYNGTFVAVLSNRVTDLISLVKPSERNIPVTNLKGEILYPSWSSIFDGARSMHGQSKANIYSFDNRNVYVDQQWPKKMVWIGADTLGNRSTKAYCDEWSSDSQQMFGTASPLDKLLEQRLLSCDNKLIVLCVELSSQASRHNHKKRWPKKRVTYDKRIRKPFAGT",
    "source": "ncbi",
    "status": "ok"
  },
  "signalp": {},
  "uniprot_features": {}
}

Analysis Results

BLAST search failed